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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1290067 chr6:112848040 A/G CDC40 chr6:110501344-110575478:+ -0.92 -8.35 1.25E-15 Box Plot
BLCA rs1290067 chr6:112848040 A/G COX7A2 chr6:75947391-75960039:- -0.64 -6.48 2.79E-10 Box Plot
BLCA rs1290067 chr6:112848040 A/G HDAC2 chr6:114254192-114332472:- -0.74 -7.42 7.58E-13 Box Plot
BLCA rs1290067 chr6:112848040 A/G NT5DC1 chr6:116422012-116570660:+ -0.74 -6.99 1.2E-11 Box Plot
BLCA rs1290067 chr6:112848040 A/G NUS1 chr6:117996665-118031803:+ -0.79 -6.72 6.69E-11 Box Plot
BLCA rs1290067 chr6:112848040 A/G OSTM1 chr6:108362613-108487058:- -0.64 -6.71 6.87E-11 Box Plot
BLCA rs1290067 chr6:112848040 A/G PCMT1 chr6:150070579-150132556:+ -0.71 -7.49 4.86E-13 Box Plot
BLCA rs1290067 chr6:112848040 A/G QRSL1 chr6:107077453-107116292:+ -0.86 -6.68 8.26E-11 Box Plot
BLCA rs1290067 chr6:112848040 A/G RPF2 chr6:111303218-111349466:+ -0.68 -6.63 1.12E-10 Box Plot
BLCA rs1290067 chr6:112848040 A/G RTN4IP1 chr6:107019846-107077362:- -0.89 -6.95 1.62E-11 Box Plot
BLCA rs1290067 chr6:112848040 A/G SEC63 chr6:108188960-108279393:- -1.02 -8.6 2.07E-16 Box Plot
BLCA rs1290067 chr6:112848040 A/G SENP6 chr6:76311225-76427994:+ -0.66 -6.42 3.97E-10 Box Plot
BLCA rs1290067 chr6:112848040 A/G SFT2D1 chr6:166733216-166756079:- -0.82 -6.84 3.09E-11 Box Plot
BLCA rs1290067 chr6:112848040 A/G SNX3 chr6:108532426-108582464:- -0.76 -6.89 2.25E-11 Box Plot
BLCA rs1290067 chr6:112848040 A/G TSPYL1 chr6:116597741-116601066:- -0.65 -6.57 1.64E-10 Box Plot